Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Gm8565-201ENSMUST00000183259 1014 ntBASIC20.2■□□□□ 0.82
Scaf11E9PZM7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Gm3786-201ENSMUST00000202659 378 ntBASIC20.2■□□□□ 0.82
Scaf11E9PZM7 AC123645.1-201ENSMUST00000228469 605 ntBASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scaf11E9PZM7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Gm12928-201ENSMUST00000117115 573 ntBASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC20.19■□□□□ 0.82
Scaf11E9PZM7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm7584-201ENSMUST00000175829 940 ntBASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm4857-201ENSMUST00000192718 785 ntBASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm37466-201ENSMUST00000195692 652 ntBASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm18934-201ENSMUST00000216671 1044 ntBASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm24526-201ENSMUST00000082921 158 ntBASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm10313-201ENSMUST00000095320 1002 ntBASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Trav13-3-201ENSMUST00000117226 336 ntBASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm13350-201ENSMUST00000120519 479 ntBASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm9823-201ENSMUST00000051212 327 ntBASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Gm10012-201ENSMUST00000078252 192 ntBASIC20.18■□□□□ 0.82
Scaf11E9PZM7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Gm13050-201ENSMUST00000122149 1345 ntBASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Gm17383-201ENSMUST00000078739 1041 ntBASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf11E9PZM7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Scaf11E9PZM7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf11E9PZM7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf11E9PZM7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf11E9PZM7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf11E9PZM7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf11E9PZM7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf11E9PZM7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf11E9PZM7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf11E9PZM7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf11E9PZM7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms