Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Krt28A6BLY7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Krt28A6BLY7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krt28A6BLY7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krt28A6BLY7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krt28A6BLY7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Krt28A6BLY7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Krt28A6BLY7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krt28A6BLY7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krt28A6BLY7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Krt28A6BLY7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krt28A6BLY7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Krt28A6BLY7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.2■□□□□ 0.18
Krt28A6BLY7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Gm8749-201ENSMUST00000117737 331 ntBASIC16.2■□□□□ 0.18
Krt28A6BLY7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.2■□□□□ 0.18
Krt28A6BLY7 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.2■□□□□ 0.18
Krt28A6BLY7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.2■□□□□ 0.18
Krt28A6BLY7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Gm37230-201ENSMUST00000194491 818 ntBASIC16.19■□□□□ 0.18
Krt28A6BLY7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.19■□□□□ 0.18
Krt28A6BLY7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 BC001981-202ENSMUST00000191393 1545 ntBASIC16.19■□□□□ 0.18
Krt28A6BLY7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Krt28A6BLY7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.18■□□□□ 0.18
Krt28A6BLY7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Gm13392-201ENSMUST00000117708 150 ntBASIC16.18■□□□□ 0.18
Krt28A6BLY7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Gm17420-201ENSMUST00000164753 153 ntBASIC16.18■□□□□ 0.18
Krt28A6BLY7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Gm42693-201ENSMUST00000196779 631 ntBASIC16.18■□□□□ 0.18
Krt28A6BLY7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Gm10478-201ENSMUST00000084451 396 ntBASIC16.18■□□□□ 0.18
Krt28A6BLY7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.18■□□□□ 0.18
Krt28A6BLY7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt28A6BLY7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms