Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.8□□□□□ -0.52
Chd6A3KFM7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.8□□□□□ -0.52
Chd6A3KFM7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Gm24990-201ENSMUST00000157406 323 ntBASIC11.79□□□□□ -0.52
Chd6A3KFM7 Gm20482-202ENSMUST00000174729 825 ntBASIC11.79□□□□□ -0.52
Chd6A3KFM7 Gm25732-201ENSMUST00000175168 60 ntBASIC11.79□□□□□ -0.52
Chd6A3KFM7 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.79□□□□□ -0.52
Chd6A3KFM7 Snora73a-201ENSMUST00000082453 205 ntBASIC11.79□□□□□ -0.52
Chd6A3KFM7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Gm44126-201ENSMUST00000204831 514 ntBASIC11.79□□□□□ -0.52
Chd6A3KFM7 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.79□□□□□ -0.52
Chd6A3KFM7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd6A3KFM7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 App-207ENSMUST00000227737 2827 ntBASIC11.78□□□□□ -0.52
Chd6A3KFM7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Gm13612-201ENSMUST00000119276 390 ntBASIC11.78□□□□□ -0.52
Chd6A3KFM7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.78□□□□□ -0.52
Chd6A3KFM7 Gm27438-201ENSMUST00000183480 110 ntBASIC11.78□□□□□ -0.52
Chd6A3KFM7 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.78□□□□□ -0.52
Chd6A3KFM7 Gm8598-201ENSMUST00000221184 836 ntBASIC11.78□□□□□ -0.52
Chd6A3KFM7 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.78□□□□□ -0.52
Chd6A3KFM7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd6A3KFM7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd6A3KFM7 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.77□□□□□ -0.52
Chd6A3KFM7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd6A3KFM7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chd6A3KFM7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms