Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm12895-201ENSMUST00000122214 226 ntBASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.14□□□□□ -0.79
Trav13d-4A0A0G2JFX3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms