Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav21-dv12A0A075B6C4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gm13884-201ENSMUST00000118103 829 ntBASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gm18246-201ENSMUST00000221023 728 ntBASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 AV026068-213ENSMUST00000223675 1171 ntBASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Carlr-201ENSMUST00000181515 2574 ntBASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav21-dv12A0A075B6C4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gm12134-201ENSMUST00000122109 520 ntBASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav21-dv12A0A075B6C4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav21-dv12A0A075B6C4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav21-dv12A0A075B6C4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms