Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm27867-201ENSMUST00000184778 125 ntBASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Olfr129-201ENSMUST00000122318 993 ntBASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav6d-5A0A075B6B9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.85□□□□□ -0.51
Trav6d-5A0A075B6B9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms