Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Gm10653-202ENSMUST00000139570 835 ntBASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-5A0A075B6B5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Gm15358-201ENSMUST00000119249 520 ntBASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Rprl3-201ENSMUST00000157400 290 ntBASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Gm22697-201ENSMUST00000175194 63 ntBASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-5A0A075B6B5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-5A0A075B6B5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-5A0A075B6B5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav6-5A0A075B6B5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-5A0A075B6B5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-5A0A075B6B5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Trav6-5A0A075B6B5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-5A0A075B6B5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms