Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Gm7862-201ENSMUST00000121461 292 ntBASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Gm43767-201ENSMUST00000198933 381 ntBASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5-4A0A075B652 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Gm11764-201ENSMUST00000120221 623 ntBASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Mir8098-201ENSMUST00000184011 137 ntBASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Gm5864-201ENSMUST00000202263 970 ntBASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Gm45167-201ENSMUST00000208007 322 ntBASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms