Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-2-dv6-2A0A075B650 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-2-dv6-2A0A075B650 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms