Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Gm10653-202ENSMUST00000139570 835 ntBASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Gm43767-201ENSMUST00000198933 381 ntBASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav7n-4A0A075B620 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Mir5130-201ENSMUST00000175160 84 ntBASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Gm8318-201ENSMUST00000182954 872 ntBASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Gm30025-201ENSMUST00000218555 728 ntBASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7n-4A0A075B620 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms