Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav4n-4A0A075B615 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav4n-4A0A075B615 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Gm12933-201ENSMUST00000120203 872 ntBASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Gm13474-201ENSMUST00000122466 815 ntBASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav4n-4A0A075B615 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms