Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm8749-201ENSMUST00000117737 331 ntBASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-1A0A075B5Z8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm9726-201ENSMUST00000180321 678 ntBASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms