Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3550W4VSN7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Gm18195-201ENSMUST00000207604 706 ntBASIC12.5□□□□□ -0.41
Gm3550W4VSN7 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3550W4VSN7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Gm4899-201ENSMUST00000178708 719 ntBASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm3550W4VSN7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms