Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm27437-201ENSMUST00000183429 107 ntBASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm27989-201ENSMUST00000184721 107 ntBASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm43352-201ENSMUST00000196419 3065 ntBASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm12151-201ENSMUST00000121374 290 ntBASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm6888-201ENSMUST00000221983 706 ntBASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nr1h3Q9Z0Y9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm5866-201ENSMUST00000177881 973 ntBASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nr1h3Q9Z0Y9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Mir7684-201ENSMUST00000183858 60 ntBASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms