Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ap4s1Q9WVL1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ap4s1Q9WVL1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ap4s1Q9WVL1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ap4s1Q9WVL1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ap4s1Q9WVL1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ap4s1Q9WVL1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.12□□□□□ -0.15
Ap4s1Q9WVL1 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.12□□□□□ -0.15
Ap4s1Q9WVL1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Gm44454-201ENSMUST00000198541 138 ntBASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Gm45328-201ENSMUST00000210942 917 ntBASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ap4s1Q9WVL1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Rprl3-201ENSMUST00000157400 290 ntBASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Gm18032-201ENSMUST00000222541 538 ntBASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ap4s1Q9WVL1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Gm10013-201ENSMUST00000106074 672 ntBASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Gm15794-201ENSMUST00000120182 631 ntBASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ap4s1Q9WVL1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms