Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Acot6-202ENSMUST00000222921 3622 ntBASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Gm7889-201ENSMUST00000185591 958 ntBASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Gm29257-201ENSMUST00000186115 639 ntBASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Gm18101-201ENSMUST00000215769 548 ntBASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn5Q9WU28 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Gm15039-201ENSMUST00000118914 875 ntBASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Gm22697-201ENSMUST00000175194 63 ntBASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn5Q9WU28 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn5Q9WU28 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn5Q9WU28 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn5Q9WU28 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn5Q9WU28 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn5Q9WU28 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Pfdn5Q9WU28 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn5Q9WU28 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn5Q9WU28 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn5Q9WU28 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pfdn5Q9WU28 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms