Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim3Q9R1R2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim3Q9R1R2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Mir8117-201ENSMUST00000184773 107 ntBASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.85□□□□□ -0.19
Trim3Q9R1R2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim3Q9R1R2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim3Q9R1R2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms