Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Gm6007-201ENSMUST00000208170 823 ntBASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.54□□□□□ -0.4
Col13a1Q9R1N9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Gm11478-201ENSMUST00000117851 599 ntBASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Gm2810-201ENSMUST00000118681 990 ntBASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Gm11543-201ENSMUST00000120758 370 ntBASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Gm12138-201ENSMUST00000122180 951 ntBASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col13a1Q9R1N9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms