Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdh17Q9R100 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.36□□□□□ -0.11
Cdh17Q9R100 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh17Q9R100 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Gm13884-201ENSMUST00000118103 829 ntBASIC14.35□□□□□ -0.11
Cdh17Q9R100 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.35□□□□□ -0.11
Cdh17Q9R100 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Gm27300-201ENSMUST00000184085 97 ntBASIC14.35□□□□□ -0.11
Cdh17Q9R100 Gm27335-201ENSMUST00000184758 97 ntBASIC14.35□□□□□ -0.11
Cdh17Q9R100 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Gm10819-201ENSMUST00000099988 561 ntBASIC14.35□□□□□ -0.11
Cdh17Q9R100 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cdh17Q9R100 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh17Q9R100 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cdh17Q9R100 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh17Q9R100 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.33□□□□□ -0.11
Cdh17Q9R100 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cdh17Q9R100 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh17Q9R100 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh17Q9R100 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh17Q9R100 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh17Q9R100 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms