Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.52■□□□□ 0.24
Chaf1aQ9QWF0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1aQ9QWF0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1aQ9QWF0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chaf1aQ9QWF0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1aQ9QWF0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Chaf1aQ9QWF0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1aQ9QWF0 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.52■□□□□ 0.23
Chaf1aQ9QWF0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1aQ9QWF0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1aQ9QWF0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1aQ9QWF0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Chaf1aQ9QWF0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chaf1aQ9QWF0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Chaf1aQ9QWF0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Gm24589-201ENSMUST00000116692 94 ntBASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Gm27459-201ENSMUST00000184860 107 ntBASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chaf1aQ9QWF0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chaf1aQ9QWF0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Gm15173-201ENSMUST00000122049 433 ntBASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Birc2-201ENSMUST00000054878 378 ntBASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chaf1aQ9QWF0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms