Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61a2Q9JLR1 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.27□□□□□ -0.28
Sec61a2Q9JLR1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a2Q9JLR1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a2Q9JLR1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Sec61a2Q9JLR1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a2Q9JLR1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Sec61a2Q9JLR1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a2Q9JLR1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a2Q9JLR1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a2Q9JLR1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sec61a2Q9JLR1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Gm14140-201ENSMUST00000119999 995 ntBASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61a2Q9JLR1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61a2Q9JLR1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms