Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3aQ9JKX8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Gm6736-201ENSMUST00000166583 948 ntBASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Mir6990-201ENSMUST00000183724 91 ntBASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3aQ9JKX8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Upk3aQ9JKX8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Upk3aQ9JKX8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Gm12134-201ENSMUST00000122109 520 ntBASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Gm44335-201ENSMUST00000196879 141 ntBASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Gm44297-201ENSMUST00000198304 141 ntBASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Gm44346-201ENSMUST00000198851 141 ntBASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3aQ9JKX8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms