Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rhox4bQ9JI43 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rhox4bQ9JI43 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.92□□□□□ -0.5
Rhox4bQ9JI43 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rhox4bQ9JI43 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rhox4bQ9JI43 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Gm30025-201ENSMUST00000218555 728 ntBASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rhox4bQ9JI43 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.9□□□□□ -0.51
Rhox4bQ9JI43 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.9□□□□□ -0.51
Rhox4bQ9JI43 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rhox4bQ9JI43 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rhox4bQ9JI43 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rhox4bQ9JI43 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Rhox4bQ9JI43 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rhox4bQ9JI43 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms