Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Gm18195-201ENSMUST00000207604 706 ntBASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Gm7506-201ENSMUST00000207758 815 ntBASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Gm6376-201ENSMUST00000209407 580 ntBASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.49□□□□□ -0.25
ClpxQ9JHS4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ClpxQ9JHS4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Gm13884-201ENSMUST00000118103 829 ntBASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Mzt1-203ENSMUST00000227948 952 ntBASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpxQ9JHS4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Gm8655-201ENSMUST00000221159 852 ntBASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ClpxQ9JHS4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms