Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Gm25144-201ENSMUST00000179561 110 ntBASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Gm25352-201ENSMUST00000179815 110 ntBASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Gm9182-201ENSMUST00000217829 639 ntBASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Timp4Q9JHB3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Gm13453-201ENSMUST00000118708 357 ntBASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Timp4Q9JHB3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Shd-206ENSMUST00000225145 998 ntBASIC15.22■□□□□ 0.03
Timp4Q9JHB3 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Timp4Q9JHB3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Gm24543-201ENSMUST00000103867 82 ntBASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Gm12428-201ENSMUST00000119844 727 ntBASIC15.21■□□□□ 0.03
Timp4Q9JHB3 Gm14057-201ENSMUST00000120631 482 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms