Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Gm10052-201ENSMUST00000168019 960 ntBASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Gm44430-201ENSMUST00000203376 995 ntBASIC14.18□□□□□ -0.14
Ube4bQ9ES00 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Gm7729-201ENSMUST00000050143 801 ntBASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4bQ9ES00 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.17□□□□□ -0.14
Ube4bQ9ES00 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4bQ9ES00 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Mir770-201ENSMUST00000103252 94 ntBASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Gm5587-201ENSMUST00000206270 674 ntBASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4bQ9ES00 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms