Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ripk4Q9ERK0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ripk4Q9ERK0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ripk4Q9ERK0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ripk4Q9ERK0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ripk4Q9ERK0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ripk4Q9ERK0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ripk4Q9ERK0 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Gm9824-201ENSMUST00000178707 561 ntBASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Gm44487-201ENSMUST00000205145 325 ntBASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ripk4Q9ERK0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.93■□□□□ 0.46
Ripk4Q9ERK0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ripk4Q9ERK0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ripk4Q9ERK0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms