Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upf1Q9EPU0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Gm12566-201ENSMUST00000121479 359 ntBASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upf1Q9EPU0 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Gm8959-201ENSMUST00000213150 571 ntBASIC16.47■□□□□ 0.23
Upf1Q9EPU0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Gm18473-201ENSMUST00000220543 868 ntBASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Celf4-206ENSMUST00000224553 1729 ntBASIC16.47■□□□□ 0.23
Upf1Q9EPU0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upf1Q9EPU0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Gm8749-201ENSMUST00000117737 331 ntBASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Gm4271-201ENSMUST00000174444 973 ntBASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upf1Q9EPU0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Upf1Q9EPU0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm15370-201ENSMUST00000117158 253 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm8213-201ENSMUST00000118191 441 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms