Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Mir5130-201ENSMUST00000175160 84 ntBASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap3s1Q9DCR2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Gm11355-201ENSMUST00000121120 306 ntBASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Gm9172-201ENSMUST00000212092 954 ntBASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Gm18101-201ENSMUST00000215769 548 ntBASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.1□□□□□ -0.31
Ap3s1Q9DCR2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Gm8344-201ENSMUST00000119813 856 ntBASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Gm27011-201ENSMUST00000182352 972 ntBASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Gm30025-201ENSMUST00000218555 728 ntBASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms