Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgn3Q9DCB1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgn3Q9DCB1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgn3Q9DCB1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgn3Q9DCB1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgn3Q9DCB1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Hmgn3Q9DCB1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgn3Q9DCB1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Gm10231-201ENSMUST00000181584 441 ntBASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Gm8318-201ENSMUST00000182954 872 ntBASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Gm10175-202ENSMUST00000208752 441 ntBASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.83□□□□□ -0.2
Hmgn3Q9DCB1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Mir770-201ENSMUST00000103252 94 ntBASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Gm9013-201ENSMUST00000132939 882 ntBASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms