Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm44771-201ENSMUST00000206975 626 ntBASIC16.16■□□□□ 0.18
Cfap53Q9D439 Thap2-203ENSMUST00000218989 527 ntBASIC16.16■□□□□ 0.18
Cfap53Q9D439 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.16■□□□□ 0.18
Cfap53Q9D439 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cfap53Q9D439 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.15■□□□□ 0.18
Cfap53Q9D439 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.15■□□□□ 0.18
Cfap53Q9D439 Gm9727-201ENSMUST00000161387 555 ntBASIC16.15■□□□□ 0.18
Cfap53Q9D439 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.15■□□□□ 0.18
Cfap53Q9D439 Gm10154-201ENSMUST00000084445 354 ntBASIC16.15■□□□□ 0.18
Cfap53Q9D439 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cfap53Q9D439 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Gm5177-201ENSMUST00000183092 997 ntBASIC16.14■□□□□ 0.17
Cfap53Q9D439 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cfap53Q9D439 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.13■□□□□ 0.17
Cfap53Q9D439 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.13■□□□□ 0.17
Cfap53Q9D439 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Gm12260-201ENSMUST00000122447 411 ntBASIC16.13■□□□□ 0.17
Cfap53Q9D439 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.13■□□□□ 0.17
Cfap53Q9D439 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cfap53Q9D439 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms