Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Gm11780-201ENSMUST00000136880 516 ntBASIC13.95□□□□□ -0.18
Upk1aQ9D132 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.95□□□□□ -0.18
Upk1aQ9D132 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.94□□□□□ -0.18
Upk1aQ9D132 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Gm18669-201ENSMUST00000216049 778 ntBASIC13.94□□□□□ -0.18
Upk1aQ9D132 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Upk1aQ9D132 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.93□□□□□ -0.18
Upk1aQ9D132 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.93□□□□□ -0.18
Upk1aQ9D132 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.93□□□□□ -0.18
Upk1aQ9D132 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.93□□□□□ -0.18
Upk1aQ9D132 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk1aQ9D132 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.92□□□□□ -0.18
Upk1aQ9D132 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Ank2-226ENSMUST00000189368 339 ntBASIC13.92□□□□□ -0.18
Upk1aQ9D132 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk1aQ9D132 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.92□□□□□ -0.18
Upk1aQ9D132 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms