Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Gm4459-201ENSMUST00000118750 468 ntBASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Rprl3-201ENSMUST00000157400 290 ntBASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Gm27867-201ENSMUST00000184778 125 ntBASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hdhd3Q9CYW4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Mir6982-201ENSMUST00000184354 68 ntBASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Matn2-206ENSMUST00000228570 2798 ntBASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hdhd3Q9CYW4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Olfr129-201ENSMUST00000122318 993 ntBASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Gm10499-201ENSMUST00000174094 934 ntBASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hdhd3Q9CYW4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms