Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr1Q9CY50 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.01■□□□□ 0.15
Ssr1Q9CY50 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
Ssr1Q9CY50 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16■□□□□ 0.15
Ssr1Q9CY50 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16■□□□□ 0.15
Ssr1Q9CY50 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Celf4-206ENSMUST00000224553 1729 ntBASIC16■□□□□ 0.15
Ssr1Q9CY50 Gm43195-201ENSMUST00000200614 2332 ntBASIC16■□□□□ 0.15
Ssr1Q9CY50 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16■□□□□ 0.15
Ssr1Q9CY50 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16■□□□□ 0.15
Ssr1Q9CY50 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Gm25927-201ENSMUST00000175058 117 ntBASIC16■□□□□ 0.15
Ssr1Q9CY50 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16■□□□□ 0.15
Ssr1Q9CY50 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16■□□□□ 0.15
Ssr1Q9CY50 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16■□□□□ 0.15
Ssr1Q9CY50 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ssr1Q9CY50 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ssr1Q9CY50 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ssr1Q9CY50 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Gm4780-202ENSMUST00000215200 2644 ntBASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ssr1Q9CY50 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ssr1Q9CY50 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms