Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cnot11Q9CWN7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Gm27628-201ENSMUST00000184911 107 ntBASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cnot11Q9CWN7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cnot11Q9CWN7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cnot11Q9CWN7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cnot11Q9CWN7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cnot11Q9CWN7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cnot11Q9CWN7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cnot11Q9CWN7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cnot11Q9CWN7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cnot11Q9CWN7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cnot11Q9CWN7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms