Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Gm7862-201ENSMUST00000121461 292 ntBASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rer1Q9CQU3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.06□□□□□ -0.48
Rer1Q9CQU3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rer1Q9CQU3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Gm18246-201ENSMUST00000221023 728 ntBASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Gm10819-201ENSMUST00000099988 561 ntBASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rer1Q9CQU3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms