Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm12008-201ENSMUST00000117791 755 ntBASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Gm24589-201ENSMUST00000116692 94 ntBASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trim8Q99PJ2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Gm43767-201ENSMUST00000198933 381 ntBASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Gm7461-201ENSMUST00000058918 827 ntBASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim8Q99PJ2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.42□□□□□ -0.1
Trim8Q99PJ2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms