Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf2ird2Q99NI3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf2ird2Q99NI3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Gm25287-201ENSMUST00000103846 110 ntBASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Gm22918-201ENSMUST00000103855 110 ntBASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Gm43474-201ENSMUST00000196415 774 ntBASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf2ird2Q99NI3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Gm2810-201ENSMUST00000118681 990 ntBASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf2ird2Q99NI3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms