Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Gm15483-201ENSMUST00000120338 456 ntBASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Col25a1Q99MQ5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Gm22902-201ENSMUST00000158488 302 ntBASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col25a1Q99MQ5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Col25a1Q99MQ5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col25a1Q99MQ5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Col25a1Q99MQ5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Col25a1Q99MQ5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Gm15678-201ENSMUST00000117573 960 ntBASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Gm27731-201ENSMUST00000185192 107 ntBASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Gm46209-201ENSMUST00000217912 553 ntBASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Gm19220-201ENSMUST00000222682 803 ntBASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms