Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf111Q99ML9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Gm11764-201ENSMUST00000120221 623 ntBASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Gm7787-201ENSMUST00000216858 688 ntBASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf111Q99ML9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Gm45167-201ENSMUST00000208007 322 ntBASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Gm15590-201ENSMUST00000078419 552 ntBASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf111Q99ML9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf111Q99ML9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf111Q99ML9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf111Q99ML9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf111Q99ML9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf111Q99ML9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf111Q99ML9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Rnf111Q99ML9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf111Q99ML9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf111Q99ML9 Mir5126-201ENSMUST00000175513 77 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms