Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx6-1Q99MA9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx6-1Q99MA9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx6-1Q99MA9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx6-1Q99MA9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx6-1Q99MA9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx6-1Q99MA9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Gm28760-201ENSMUST00000185995 736 ntBASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Gm10766-202ENSMUST00000194123 606 ntBASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Gm18624-201ENSMUST00000220966 658 ntBASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Gm9797-201ENSMUST00000052902 613 ntBASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx6-1Q99MA9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm17150-201ENSMUST00000165577 381 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm27631-201ENSMUST00000184163 466 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Mir6392-201ENSMUST00000184924 108 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm29310-201ENSMUST00000185468 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21825-201ENSMUST00000185728 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm29109-201ENSMUST00000185895 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21896-201ENSMUST00000186520 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21873-201ENSMUST00000186728 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21794-201ENSMUST00000187056 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21880-201ENSMUST00000187275 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21826-201ENSMUST00000187451 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21198-201ENSMUST00000188393 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21749-201ENSMUST00000189343 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21901-201ENSMUST00000189568 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm29424-201ENSMUST00000189716 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm28599-201ENSMUST00000189838 694 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21867-201ENSMUST00000189917 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm29269-201ENSMUST00000190087 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21722-201ENSMUST00000190153 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm28423-201ENSMUST00000190701 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21899-201ENSMUST00000190745 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21910-201ENSMUST00000191163 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21849-201ENSMUST00000191571 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm28678-201ENSMUST00000191593 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm20910-201ENSMUST00000193268 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm21871-201ENSMUST00000194621 696 ntBASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms