Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Gm5566-201ENSMUST00000116118 459 ntBASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Gm13829-201ENSMUST00000119600 138 ntBASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.71□□□□□ -0.05
Cstf1Q99LC2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.71□□□□□ -0.05
Cstf1Q99LC2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Mir1938-201ENSMUST00000158746 100 ntBASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cstf1Q99LC2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cstf1Q99LC2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cstf1Q99LC2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cstf1Q99LC2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cstf1Q99LC2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Cstf1Q99LC2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cstf1Q99LC2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Cstf1Q99LC2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cstf1Q99LC2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Gm15653-201ENSMUST00000119247 907 ntBASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Gm14042-201ENSMUST00000120139 833 ntBASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Mir1897-201ENSMUST00000122581 272 ntBASIC14.7□□□□□ -0.06
Cstf1Q99LC2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.7□□□□□ -0.06
Cstf1Q99LC2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.7□□□□□ -0.06
Cstf1Q99LC2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cstf1Q99LC2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cstf1Q99LC2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms