Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb1Q91Y08 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Gm9385-201ENSMUST00000117563 472 ntBASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Gm18206-201ENSMUST00000207027 926 ntBASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb1Q91Y08 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Olfr286-202ENSMUST00000205305 969 ntBASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb1Q91Y08 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Gm12260-201ENSMUST00000122447 411 ntBASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Gm44492-201ENSMUST00000197012 141 ntBASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms