Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb18Q91Y02 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb18Q91Y02 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdhb18Q91Y02 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.41■□□□□ 0.06
Pcdhb18Q91Y02 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb18Q91Y02 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb18Q91Y02 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb18Q91Y02 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb18Q91Y02 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb18Q91Y02 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Gm13015-201ENSMUST00000118674 204 ntBASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Gm25144-201ENSMUST00000179561 110 ntBASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Gm25352-201ENSMUST00000179815 110 ntBASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Gm29541-201ENSMUST00000191351 678 ntBASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb18Q91Y02 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Gm23547-201ENSMUST00000158210 271 ntBASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb18Q91Y02 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Mir7684-201ENSMUST00000183858 60 ntBASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms