Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Gm12008-201ENSMUST00000117791 755 ntBASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Gm13884-201ENSMUST00000118103 829 ntBASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Gm12644-201ENSMUST00000119935 606 ntBASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Gm6257-201ENSMUST00000163864 910 ntBASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Gm5864-201ENSMUST00000202263 970 ntBASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb3Q91XZ7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.76□□□□□ -0.05
Pcdhb3Q91XZ7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Gm15165-201ENSMUST00000118140 502 ntBASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb3Q91XZ7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms