Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Gm2272-201ENSMUST00000194903 582 ntBASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgc5Q91XW9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Gm13823-201ENSMUST00000119930 345 ntBASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Gm15693-201ENSMUST00000120470 637 ntBASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgc5Q91XW9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Gm27306-201ENSMUST00000183970 107 ntBASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgc5Q91XW9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Gm43767-201ENSMUST00000198933 381 ntBASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms