Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.91■□□□□ 0.3
Ddx41Q91VN6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx41Q91VN6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.9■□□□□ 0.3
Ddx41Q91VN6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Gm13616-201ENSMUST00000120600 222 ntBASIC16.9■□□□□ 0.3
Ddx41Q91VN6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.9■□□□□ 0.3
Ddx41Q91VN6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ddx41Q91VN6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.89■□□□□ 0.3
Ddx41Q91VN6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ddx41Q91VN6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ddx41Q91VN6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Mir6956-201ENSMUST00000183598 62 ntBASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx41Q91VN6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx41Q91VN6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Efs-202ENSMUST00000227037 2540 ntBASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms