Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.35□□□□□ -0.43
H1fooQ8VIK3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
H1fooQ8VIK3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Carlr-201ENSMUST00000181515 2574 ntBASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H1fooQ8VIK3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
H1fooQ8VIK3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
H1fooQ8VIK3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
H1fooQ8VIK3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Gm12134-201ENSMUST00000122109 520 ntBASIC12.33□□□□□ -0.44
H1fooQ8VIK3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Gm27300-201ENSMUST00000184085 97 ntBASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Gm27335-201ENSMUST00000184758 97 ntBASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Gm2651-201ENSMUST00000203560 838 ntBASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.33□□□□□ -0.44
H1fooQ8VIK3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
H1fooQ8VIK3 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms