Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Gm13036-201ENSMUST00000117799 748 ntBASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.12□□□□□ -0.15
Lsm1Q8VC85 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm1Q8VC85 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Gm8749-201ENSMUST00000117737 331 ntBASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Mir8098-201ENSMUST00000184011 137 ntBASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.11□□□□□ -0.15
Lsm1Q8VC85 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.11□□□□□ -0.15
Lsm1Q8VC85 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm1Q8VC85 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms