Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpap2Q8VC34 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rpap2Q8VC34 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rpap2Q8VC34 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.14■□□□□ 0.18
Rpap2Q8VC34 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Rpap2Q8VC34 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.14■□□□□ 0.17
Rpap2Q8VC34 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rpap2Q8VC34 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Gm23547-201ENSMUST00000158210 271 ntBASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rpap2Q8VC34 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm11543-201ENSMUST00000120758 370 ntBASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm12134-201ENSMUST00000122109 520 ntBASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm27920-201ENSMUST00000183953 96 ntBASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm45098-201ENSMUST00000207179 657 ntBASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm18057-201ENSMUST00000208220 503 ntBASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.12■□□□□ 0.17
Rpap2Q8VC34 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm9182-201ENSMUST00000217829 639 ntBASIC16.12■□□□□ 0.17
Rpap2Q8VC34 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms